Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790635.1_cds_XP_016502802.1_1555
CDS Infomation

[gene=LOC107820950] [db_xref=GeneID:107820950] [protein=serine/threonine-protein kinase tricorner-like] [protein_id=XP_016502802.1] [location=join(25615..25817,25911..26085,26919..27002,27163..27404,28138..28369,28504..28668,28911..29042,29268..29381,29864..29911,30296..30472)] [gbkey=CDS]
Sequence

ATGGAGGGTACTACTACTGCTGCTGGTGGTACTGTAAAGATGGGAGCTTTACCAATGAAT
AAGCCTGATCGAGTTTTCAATAATTTGGAGCCTGAATTCACTGTTTCTTCACCTGTTACA
CGTCAGAAAGCTGCTGCTGCTAAGCAATTCATTGAAAATCATTACAAGAATTATCTTCAA
GGCTTGCAAGATCGCAAAGAAAGGCGATGGACACTGCAGAGGAGGGCACAAGAAGCGCAG
ATACCGAGTGAGGAGCAAGAGAAGATGTTAAGGAATTTGGAGAAGAGGGAGACTGAGTTT
ATGAGATTGCAAAGGCATAAAGTTGGGATTGATGATTTTGAACAGTTGACTGTCATTGGT
AAAGGTGCCTTTGGTGAGGTTAGGTTGTGTAGATTCAAAAGTACTGGAGAAATTTTTGCC
ATGAAGAAATTGAAGAAGTCCGACATGCTTAGCCGTGGACAGGTTGAGCATGTCAGATCC
GAGAGAAACTTGCTTGTGGAAGTTGATAGTCGGTGCATAGTGAAGCTCTTCTATTCTTTC
CAAGACTCAGATTTCTTGTACCTCATAATGGAATATTTACCTGGTGGTGACATTATGACC
TTACTTATGAGAGAAGATGTTCTTTCTGAAGATGTCGCGCGGTTCTACATTGCTGAGAGT
ATTTTGGCTATTCAGTCTATTCATCAGCACAATTATGTACATAGGGACATAAAACCTGAT
AACCTTATACTGGATAGAAATGGCCATTTAAAGCTTTCCGATTTTGGCTTATGTAAACCC
CTGGAAAATAAATACTCATCAATATTATTGGAAGATGAAGACCTTACAAATGCGGAGTCC
ATTAACGGGACTGAAGGGAATTCTGCTGGTGATAGAGCTTCATGGCCAATGCCAAAAGAA
CAAATACAGCAGTGGAAGCGCAACCGCCGTGCCCTGGCATACTCTACCGTTGGAACTCTT
GATTACATGGCACCAGAGGTTTTGTTGAAAAAAGGATATGGAATTGAATGTGATTGGTGG
TCATTGGGGGCAATCCTGTTTGAGATGGTTGTTGGGTATCCTCCCTTCTGTTCAGAGCAT
CCAAGAATGACGGCGCGCAAGATAATCAGTTGGAGAACATGCCTTAAATTCCCAGAAGAA
CCAAAAGTATCAGATGAGGCTAAGGATCTGATCTGTCGTTTATTATGTGATGTTGAATCA
AGACTGGGGACCGGAGGAGTGGAAGAAATAACGGCTCATCCTTGGTTCAAAGGAGTCAAC
TGGGACATGCTTTATGAAATGGAGGCTGCCTATAAACCTATTGTGACCGGAGAGTTAGAT
ACTCAAAATTTTGAGAAGTTTCCTGAGGTAGAAGATCCTTCAGCAACAGCACCAAGAGTT
GGACCCTGGCGAAAGATGCTGACATCAAAAGATTCCAATTTTATTGGATTTACTTTCAAG
AAATCAGATATCCTCAAATCAGCTGAAGCTTCAGGTGTGCTGCTGCTTTATATCTTTAAT
TTCTTGGCTGCATCATCTCTGCATCTCATCACTGCATATGCACCATCTTTCTATTGTACA
AAAGAGGTCTGA

Peptide Sequence

PEP ID

XP_016502802.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase tricorner-like [Nicotiana tabacum]
Sequence

MEGTTTAAGGTVKMGALPMNKPDRVFNNLEPEFTVSSPVTRQKAAAAKQFIENHYKNYLQ
GLQDRKERRWTLQRRAQEAQIPSEEQEKMLRNLEKRETEFMRLQRHKVGIDDFEQLTVIG
KGAFGEVRLCRFKSTGEIFAMKKLKKSDMLSRGQVEHVRSERNLLVEVDSRCIVKLFYSF
QDSDFLYLIMEYLPGGDIMTLLMREDVLSEDVARFYIAESILAIQSIHQHNYVHRDIKPD
NLILDRNGHLKLSDFGLCKPLENKYSSILLEDEDLTNAESINGTEGNSAGDRASWPMPKE
QIQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAILFEMVVGYPPFCSEH
PRMTARKIISWRTCLKFPEEPKVSDEAKDLICRLLCDVESRLGTGGVEEITAHPWFKGVN
WDMLYEMEAAYKPIVTGELDTQNFEKFPEVEDPSATAPRVGPWRKMLTSKDSNFIGFTFK
KSDILKSAEASGVLLLYIFNFLAASSLHLITAYAPSFYCTKEV

Transcript Sequence

Gene sequence data has not been registered.